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180 million genetic variants found in 9772 individuals

Context: GenomeIndia Project

  • GenomeIndia is a government-funded pan-India initiative to catalogue the genetic diversity of the Indian population.
  • It aims to build a comprehensivedatabase of Indian genomes to enhance understanding of:
    • Genetic diseases
    • Drug response variation
    • Population structure
    • Precision medicine potential

Relevance : GS 3(Science and Technology)

Key Findings of the Preliminary Study

  • Sample Size:
    • 20,000 individuals enrolled.
    • 10,074 DNA samples sequenced (from 85 populations: 32 tribal + 53 non-tribal).
    • Final analysis on 9,772 individuals (4,696 male + 5,076 female).
  • Genome Diversity:
    • 180 million genetic variants identified.
    • Variants include:
      • Rare variants
      • Community-specific variants
      • India-unique variants
      • Disease-associated variants
      • Variants influencing therapeutic response or resistance.
  • Populations covered:
    • Tribal groups: Tibeto-Burman, Indo-European, Dravidian, Austro-Asiatic.
    • Non-tribal groups: Same linguistic categories.
    • Admixed outgroup included for comparative insights.
  • Data Storage:
    • Genome sequence data housed at Indian Biological Data Centre, Faridabad, Haryana.

Scientific & Medical Significance

  • Precision Medicine:
    • Enables personalised treatment based on genetic makeup.
    • Identifies people at risk for specific diseases → early interventions.
  • Disease Detection:
    • Facilitates development of low-cost diagnostics.
    • Improves detection of hereditary conditions (e.g., thalassemia, cancer predisposition).
  • Drug Response:
    • Predicts how different groups respond or react adversely to medications.
    • Enhances pharmacogenomics (customized drug treatment plans).
  • Public Health:
    • Informs targeted vaccination and therapy strategies in epidemiology.
    • Can reduce trial-and-error treatment, especially in chronic and rare diseases.

Scientific Methodology & Rigour

  • Whole Genome Sequencing (WGS) used — gives high-resolution genetic insights.
  • Median sample:
    • 159 per non-tribal group, 75 per tribal group.
    • Sufficient for identifying rare, population-specific variants.
  • Integrates genomic data with biochemistry & anthropometric parameters — unique approach in India.

Way Forward

  • Upcoming detailed paper to give deeper insight into disease linkages.
  • Development of India-specific genomic risk scores.
  • Public-private collaborations for translating genetic insights into affordable diagnostics.
  • Integration into Ayushman Bharat Digital Mission or National Health Stack.

April 2025
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